generate slides based on output

generate slides based on output

generate_slides(
  outputs,
  outfile = paste0(tempdir(), "/output.pptx"),
  template = file.path(system.file(package = "autoslider.core"), "theme/basic.pptx"),
  fig_width = 9,
  fig_height = 6,
  t_lpp = 20,
  t_cpp = 200,
  l_lpp = 20,
  l_cpp = 150,
  ...
)

Arguments

outputs

List of output

outfile

Out file path

template

Template file path

fig_width

figure width in inch

fig_height

figure height in inch

t_lpp

An integer specifying the table lines per page
Specify this optional argument to modify the length of all of the table displays

t_cpp

An integer specifying the table columns per page
Specify this optional argument to modify the width of all of the table displays

l_lpp

An integer specifying the listing lines per page
Specify this optional argument to modify the length of all of the listings display

l_cpp

An integer specifying the listing columns per page
Specify this optional argument to modify the width of all of the listings display

...

arguments passed to program

Value

No return value, called for side effects

Examples

# Example 1. When applying to the whole pipeline
library(dplyr)
data <- list(
  adsl = eg_adsl %>% dplyr::mutate(FASFL = SAFFL),
  adae = eg_adae
)


filters::load_filters(
  yaml_file = system.file("filters.yml", package = "autoslider.core"),
  overwrite = TRUE
)


spec_file <- system.file("spec.yml", package = "autoslider.core")
spec_file %>%
  read_spec() %>%
  filter_spec(program %in% c("t_dm_slide")) %>%
  generate_outputs(datasets = data) %>%
  decorate_outputs() %>%
  generate_slides()
#> ✔ 2/51 outputs matched the filter condition `program %in% c("t_dm_slide")`.
#> ❯ Running program `t_dm_slide` with suffix 'FAS'.
#> Filter 'FAS' matched target ADSL.
#> 400/400 records matched the filter condition `FASFL == 'Y'`.
#> ❯ Running program `t_dm_slide` with suffix 'FAS'.
#> Filter 'FAS' matched target ADSL.
#> 400/400 records matched the filter condition `FASFL == 'Y'`.
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set (cont.)"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set (cont.)"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set (cont.)"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set (cont.)"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...
#> [1] " Patient Demographics and Baseline Characteristics, Full Analysis Set (cont.)"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...

# Example 2. When applying to an rtable object or an rlisting object
adsl <- eg_adsl
t_dm_slide(adsl, "TRT01P", c("SEX", "AGE")) %>%
  generate_slides()
#> [1] "Demographic slide"
#> Warning: Calling `add_slide()` without specifying a `layout` is deprecated.
#>  Please pass a `layout` or use `layout_default()` to set a default.
#>  => I will now continue with the former `layout` default "Title and Content" for backwards compatibility...