R/batchtools_interactive.R
batchtools_interactive.RdThe batchtools interactive backend is useful for verifying parts of your batchtools setup locally, while still being able to do interactive debugging.
batchtools_interactive(
...,
fs.latency = 0,
delete = getOption("future.batchtools.delete", "on-success")
)[numeric(1)]
Expected maximum latency of the file system, in seconds.
Set to a positive number for network file systems like NFS which enables more robust (but also more expensive) mechanisms to
access files and directories.
Usually safe to set to 0 to disable the heuristic, e.g. if you are working on a local file system.
Controls if and when the batchtools job registry folder is
deleted.
If "on-success" (default), it is deleted if the future was resolved
successfully and the expression did not produce an error.
If "never", then it is never deleted.
If "always", then it is always deleted.
Not used.
Batchtools interactive futures use batchtools cluster functions
created by batchtools::makeClusterFunctionsInteractive() with
external = TRUE.
An alternative to the batchtools interactive backend is to use
plan(future::sequential), which is a faster way process futures
sequentially and that also can be debugged interactively.
library(future)
plan(future.batchtools::batchtools_interactive)
message("Main process ID: ", Sys.getpid())
#> Main process ID: 942212
f <- future({
data.frame(
hostname = Sys.info()[["nodename"]],
os = Sys.info()[["sysname"]],
cores = unname(parallelly::availableCores()),
pid = Sys.getpid(),
modules = Sys.getenv("LOADEDMODULES")
)
})
info <- value(f)
print(info)
#> hostname os cores pid modules
#> 1 ip-10-2-72-104 Linux 4 942212