Skip to contents

Pedigree-drawing with graphviz

Usage

pedtodot_verbatim(f)

Arguments

f

A data.frame containing pedigrees, each with pedigree id, individual id, father id, mother id, sex and affection status.

Value

For each pedigree, a Graphviz DOT file is written to the working directory.

Details

Read a GAS or LINKAGE pedigree and write a Graphviz DOT representation for each pedigree.

This is a verbatim translation of the original pedtodot implemented in Bash/awk. To check independently, try xclip < pedtodot_verbatim.R and paste into an R session.

Note

Adapted from Bash/awk script by David Duffy

Examples

if (FALSE) { # \dontrun{
# pedigree p3 in pedtodot
  pedtodot_verbatim(p3)
} # }