Package index

All functions

aSAH

Subarachnoid hemorrhage data

are.paired()

Are two ROC curves paired?

auc()

Compute the area under the ROC curve

ci()

Compute the confidence interval of a ROC curve

ci.auc(<roc>) ci.auc(<smooth.roc>) ci.auc(<auc>) ci.auc(<multiclass.roc>) ci.auc(<multiclass.auc>) ci.auc(<formula>) ci.auc(<default>)

Compute the confidence interval of the AUC

ci.coords(<roc>) ci.coords(<formula>) ci.coords(<smooth.roc>) ci.coords(<default>)

Compute the confidence interval of arbitrary coordinates

ci.se(<roc>) ci.se(<smooth.roc>) ci.se(<formula>) ci.se(<default>)

Compute the confidence interval of sensitivities at given specificities

ci.sp(<roc>) ci.sp(<smooth.roc>) ci.sp(<formula>) ci.sp(<default>)

Compute the confidence interval of specificities at given sensitivities

ci.thresholds(<roc>) ci.thresholds(<formula>) ci.thresholds(<smooth.roc>) ci.thresholds(<default>)

Compute the confidence interval of thresholds

coords()

Coordinates of a ROC curve

coords_transpose

Transposing the output of coords

cov()

Covariance of two paired ROC curves

geom_polygon_auc(<auc>) geom_polygon_auc(<roc>) geom_polygon_auc(<smooth.roc>)

Add an AUC polygon to a ggroc plot

ggroc(<roc>) ggroc(<smooth.roc>) ggroc(<list>)

Plot a ROC curve with ggplot2

Math() Ops()

pROC Group Generic Functions

has.partial.auc()

Does the ROC curve have a partial AUC?

lines(<roc>) lines(<smooth.roc>) lines.roc(<roc>) lines.roc(<formula>) lines.roc(<default>) lines.roc(<smooth.roc>)

Add a ROC line to a ROC plot

multiclass.roc()

Multi-class AUC

pROC-package pROC

pROC

plot(<ci.thresholds>) plot(<ci.sp>) plot(<ci.se>) plot(<ci.coords>)

Plot confidence intervals

plot(<roc>) plot(<smooth.roc>) plot.roc(<roc>) plot.roc(<formula>) plot.roc(<default>) plot.roc(<smooth.roc>)

Plot a ROC curve

power.roc.test()

Sample size and power computation for ROC curves

print(<roc>) print(<multiclass.roc>) print(<mv.multiclass.roc>) print(<smooth.roc>) print(<auc>) print(<multiclass.auc>) print(<ci.auc>) print(<ci.thresholds>) print(<ci.se>) print(<ci.sp>) print(<ci.coords>)

Print a ROC curve object

roc() roc_()

Build a ROC curve

roc.test(<roc>) roc.test(<auc>) roc.test(<smooth.roc>) roc.test(<formula>) roc.test(<default>)

Compare two ROC curves

smooth()

Smooth a ROC curve

var()

Variance of a ROC curve