Plot base::matrix — autoplot.matrix • ggfortify

Plot base::matrix

Usage

# S3 method for class 'matrix'
autoplot(
  object,
  original = NULL,
  geom = "tile",
  colour = NULL,
  size = NULL,
  alpha = NULL,
  fill = "#0000FF",
  shape = NULL,
  label = FALSE,
  label.label = "rownames",
  label.colour = colour,
  label.alpha = NULL,
  label.size = NULL,
  label.angle = NULL,
  label.family = NULL,
  label.fontface = NULL,
  label.lineheight = NULL,
  label.hjust = NULL,
  label.vjust = NULL,
  label.repel = FALSE,
  scale = NULL,
  xlim = c(NA, NA),
  ylim = c(NA, NA),
  log = "",
  main = NULL,
  xlab = NULL,
  ylab = NULL,
  asp = NULL,
  ...
)

Arguments

object: base::matrix instance
original: Combined to data by column if provided. Intended to be used for stat functions which returns not containing original data.
geom: Geometric string for plotting. 'tile' or 'point'.
colour: colour for points ('point' only)
size: point size
alpha: alpha
fill: fill colour. Ignored if scale keyword is passed. ('tile' Only)
shape: point shape
label: Logical value whether to display labels
label.label: Column name used for label text
label.colour: Colour for text labels
label.alpha: Alpha for text labels
label.size: Size for text labels
label.angle: Angle for text labels
label.family: Font family for text labels
label.fontface: Fontface for text labels
label.lineheight: Lineheight for text labels
label.hjust: Horizontal adjustment for text labels
label.vjust: Vertical adjustment for text labels
label.repel: Logical flag indicating whether to use ggrepel, enabling this may take some time for plotting
scale: (Deprecated) ggplot2::scale instance to plot. ('tile' Only)
xlim: limits for x axis
ylim: limits for y axis
log: which variables to log transform ("x", "y", or "xy")
main: character vector or expression for plot title
xlab: character vector or expression for x axis label
ylab: character vector or expression for y axis label
asp: the y/x aspect ratio
...: other arguments passed to methods

Value

ggplot

Examples

autoplot(matrix(rnorm(20), nc = 5))
#> Warning: Arguments in `...` must be used.
#> ✖ Problematic argument:
#> • original = original
#> ℹ Did you misspell an argument name?
#> Scale for y is already present.
#> Adding another scale for y, which will replace the existing scale.

autoplot(matrix(rnorm(20), nc = 5), fill = 'red')
#> Warning: Arguments in `...` must be used.
#> ✖ Problematic argument:
#> • original = original
#> ℹ Did you misspell an argument name?
#> Scale for y is already present.
#> Adding another scale for y, which will replace the existing scale.

autoplot(matrix(rnorm(20), nc = 2), geom = 'point')
#> Warning: Arguments in `...` must be used.
#> ✖ Problematic argument:
#> • original = original
#> ℹ Did you misspell an argument name?